Cluster: HRGMv2_4706_CGC10
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4706
- CGC Family ID: CGCFAM_02354
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4706_5 | HRGMv2_4706_5_1 | 217 | 2445 | - | GH36 |
| TF | HRGMv2_4706_5 | HRGMv2_4706_5_2 | 2573 | 3433 | - | HTH_AraC | HTH_AraC |
| pfam | HRGMv2_4706_5 | HRGMv2_4706_5_3 | 3508 | 4302 | - | adh_short | KR | adh_short_C2 |
| TC | HRGMv2_4706_5 | HRGMv2_4706_5_4 | 4315 | 5154 | - | 8.A.5.1.4 |
Gene ID: HRGMv2_4706_5_1
Type: CAZyme
Location: 217 - 2445 (-)
Type: CAZyme
Location: 217 - 2445 (-)
Gene ID: HRGMv2_4706_5_2
Type: TF
Location: 2573 - 3433 (-)
Type: TF
Location: 2573 - 3433 (-)
Gene ID: HRGMv2_4706_5_3
Type: pfam
Location: 3508 - 4302 (-)
Type: pfam
Location: 3508 - 4302 (-)
Gene ID: HRGMv2_4706_5_4
Type: TC
Location: 4315 - 5154 (-)
Type: TC
Location: 4315 - 5154 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_C
Class
Negativicutes
Order
Selenomonadales
Family
Selenomonadaceae
Genus
Megamonas
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.