Cluster: HRGMv2_4705_CGC7
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4705
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4705_5 | HRGMv2_4705_5_36 | 34340 | 35578 | + | 2.A.6.4.2 |
| TC | HRGMv2_4705_5 | HRGMv2_4705_5_37 | 35575 | 36501 | + | 2.A.6.4.3 |
| TC | HRGMv2_4705_5 | HRGMv2_4705_5_38 | 36735 | 37898 | + | 2.A.1.2.18 |
| CAZyme | HRGMv2_4705_5 | HRGMv2_4705_5_39 | 38158 | 41160 | - | GH2 |
| TC | HRGMv2_4705_5 | HRGMv2_4705_5_40 | 41273 | 42682 | - | 2.A.2.2.1 |
| TC | HRGMv2_4705_5 | HRGMv2_4705_5_41 | 42766 | 43365 | - | 2.A.115.2.14 |
| TC | HRGMv2_4705_5 | HRGMv2_4705_5_42 | 43936 | 44802 | - | 2.A.7.3.58 |
Gene ID: HRGMv2_4705_5_36
Type: TC
Location: 34340 - 35578 (+)
Type: TC
Location: 34340 - 35578 (+)
Gene ID: HRGMv2_4705_5_37
Type: TC
Location: 35575 - 36501 (+)
Type: TC
Location: 35575 - 36501 (+)
Gene ID: HRGMv2_4705_5_38
Type: TC
Location: 36735 - 37898 (+)
Type: TC
Location: 36735 - 37898 (+)
Gene ID: HRGMv2_4705_5_39
Type: CAZyme
Location: 38158 - 41160 (-)
Type: CAZyme
Location: 38158 - 41160 (-)
Gene ID: HRGMv2_4705_5_40
Type: TC
Location: 41273 - 42682 (-)
Type: TC
Location: 41273 - 42682 (-)
Gene ID: HRGMv2_4705_5_41
Type: TC
Location: 42766 - 43365 (-)
Type: TC
Location: 42766 - 43365 (-)
Gene ID: HRGMv2_4705_5_42
Type: TC
Location: 43936 - 44802 (-)
Type: TC
Location: 43936 - 44802 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_C
Class
Negativicutes
Order
Selenomonadales
Family
Selenomonadaceae
Genus
Megamonas
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.