Cluster: HRGMv2_4705_CGC6
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 6
- Substrate:
- Genome ID: HRGMv2_4705
- CGC Family ID: CGCFAM_01628
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4705_5 | HRGMv2_4705_5_1 | 99 | 1115 | + | GT9 |
| TC | HRGMv2_4705_5 | HRGMv2_4705_5_2 | 1289 | 1957 | + | 9.B.2.5.4 |
| CAZyme | HRGMv2_4705_5 | HRGMv2_4705_5_3 | 1968 | 2795 | - | CE4 |
| CAZyme | HRGMv2_4705_5 | HRGMv2_4705_5_4 | 2865 | 3872 | + | GT9 |
| CAZyme | HRGMv2_4705_5 | HRGMv2_4705_5_5 | 3882 | 4940 | + | GT9 |
| CAZyme | HRGMv2_4705_5 | HRGMv2_4705_5_6 | 4944 | 5960 | + | GT8 |
| CAZyme | HRGMv2_4705_5 | HRGMv2_4705_5_7 | 5974 | 7050 | + | GT4 |
Gene ID: HRGMv2_4705_5_1
Type: CAZyme
Location: 99 - 1115 (+)
Type: CAZyme
Location: 99 - 1115 (+)
Gene ID: HRGMv2_4705_5_2
Type: TC
Location: 1289 - 1957 (+)
Type: TC
Location: 1289 - 1957 (+)
Gene ID: HRGMv2_4705_5_3
Type: CAZyme
Location: 1968 - 2795 (-)
Type: CAZyme
Location: 1968 - 2795 (-)
Gene ID: HRGMv2_4705_5_4
Type: CAZyme
Location: 2865 - 3872 (+)
Type: CAZyme
Location: 2865 - 3872 (+)
Gene ID: HRGMv2_4705_5_5
Type: CAZyme
Location: 3882 - 4940 (+)
Type: CAZyme
Location: 3882 - 4940 (+)
Gene ID: HRGMv2_4705_5_6
Type: CAZyme
Location: 4944 - 5960 (+)
Type: CAZyme
Location: 4944 - 5960 (+)
Gene ID: HRGMv2_4705_5_7
Type: CAZyme
Location: 5974 - 7050 (+)
Type: CAZyme
Location: 5974 - 7050 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_C
Class
Negativicutes
Order
Selenomonadales
Family
Selenomonadaceae
Genus
Megamonas
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.