Cluster: HRGMv2_4705_CGC5
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4705
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4705_4 | HRGMv2_4705_4_109 | 119736 | 120461 | + | 3.A.1.3.16 |
| TC | HRGMv2_4705_4 | HRGMv2_4705_4_110 | 120521 | 121411 | + | 3.A.1.3.16 |
| TC | HRGMv2_4705_4 | HRGMv2_4705_4_111 | 121548 | 122258 | + | 3.A.1.3.16 |
| TC | HRGMv2_4705_4 | HRGMv2_4705_4_112 | 122255 | 123055 | + | 3.A.1.3.19 |
| CAZyme | HRGMv2_4705_4 | HRGMv2_4705_4_113 | 123134 | 125104 | - | GH127 |
| TC | HRGMv2_4705_4 | HRGMv2_4705_4_114 | 125176 | 126531 | - | 2.A.2.3.3 |
Gene ID: HRGMv2_4705_4_109
Type: TC
Location: 119736 - 120461 (+)
Type: TC
Location: 119736 - 120461 (+)
Gene ID: HRGMv2_4705_4_110
Type: TC
Location: 120521 - 121411 (+)
Type: TC
Location: 120521 - 121411 (+)
Gene ID: HRGMv2_4705_4_111
Type: TC
Location: 121548 - 122258 (+)
Type: TC
Location: 121548 - 122258 (+)
Gene ID: HRGMv2_4705_4_112
Type: TC
Location: 122255 - 123055 (+)
Type: TC
Location: 122255 - 123055 (+)
Gene ID: HRGMv2_4705_4_113
Type: CAZyme
Location: 123134 - 125104 (-)
Type: CAZyme
Location: 123134 - 125104 (-)
Gene ID: HRGMv2_4705_4_114
Type: TC
Location: 125176 - 126531 (-)
Type: TC
Location: 125176 - 126531 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_C
Class
Negativicutes
Order
Selenomonadales
Family
Selenomonadaceae
Genus
Megamonas
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.