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Cluster: HRGMv2_4705_CGC3

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_4705_2 HRGMv2_4705_2_108 108016 110274 + GH36
CAZyme HRGMv2_4705_2 HRGMv2_4705_2_109 110377 111456 - GH170
TC HRGMv2_4705_2 HRGMv2_4705_2_110 111475 112860 - 4.A.1.2.9
STP HRGMv2_4705_2 HRGMv2_4705_2_111 112886 113788 - SIS
NULL(UNKNOWN) HRGMv2_4705_2 HRGMv2_4705_2_112 113927 114538 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_4705_2 HRGMv2_4705_2_113 114836 117433 + 3.A.9.1.2
pfam HRGMv2_4705_2 HRGMv2_4705_2_114 117542 119551 - BRCT | DNA_ligase_aden | DNA_ligase_ZBD | DNA_ligase_OB | PTCB-BRCT | HHH_2 | HHH_5 | Nlig-Ia
TF HRGMv2_4705_2 HRGMv2_4705_2_115 119559 120005 - MerR
TC HRGMv2_4705_2 HRGMv2_4705_2_116 120244 121233 + 8.A.5.1.3
Gene ID: HRGMv2_4705_2_108
Type: CAZyme
Location: 108016 - 110274 (+)
Gene ID: HRGMv2_4705_2_109
Type: CAZyme
Location: 110377 - 111456 (-)
Gene ID: HRGMv2_4705_2_110
Type: TC
Location: 111475 - 112860 (-)
Gene ID: HRGMv2_4705_2_111
Type: STP
Location: 112886 - 113788 (-)
Gene ID: HRGMv2_4705_2_112
Type:
Location: 113927 - 114538 (+)
Gene ID: HRGMv2_4705_2_113
Type: TC
Location: 114836 - 117433 (+)
Gene ID: HRGMv2_4705_2_114
Type: pfam
Location: 117542 - 119551 (-)
Gene ID: HRGMv2_4705_2_115
Type: TF
Location: 119559 - 120005 (-)
Gene ID: HRGMv2_4705_2_116
Type: TC
Location: 120244 - 121233 (+)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacillota_C
→
Class
Negativicutes
→
Order
Selenomonadales
→
Family
Selenomonadaceae
→
Genus
Megamonas
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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