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Cluster: HRGMv2_4705_CGC21

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_4705_31 HRGMv2_4705_31_1 583 960 + 1.A.43.1.1
pfam HRGMv2_4705_31 HRGMv2_4705_31_2 1009 1467 - DUF441
TC HRGMv2_4705_31 HRGMv2_4705_31_3 1702 2517 + 3.A.1.3.3
pfam HRGMv2_4705_31 HRGMv2_4705_31_4 2599 3252 - Flavin_Reduct | RUBY_RBDX
TC HRGMv2_4705_31 HRGMv2_4705_31_5 3405 4283 + 2.A.7.3.31
pfam HRGMv2_4705_31 HRGMv2_4705_31_6 4339 4761 - YgbA_NO
TC HRGMv2_4705_31 HRGMv2_4705_31_7 4982 6022 + 3.A.1.24.1
TC HRGMv2_4705_31 HRGMv2_4705_31_8 6012 6668 + 3.A.1.24.5
TC HRGMv2_4705_31 HRGMv2_4705_31_9 6692 7531 + 3.A.1.24.5
CAZyme HRGMv2_4705_31 HRGMv2_4705_31_10 7697 9430 + GH13_4
TC HRGMv2_4705_31 HRGMv2_4705_31_11 9514 10833 - 9.A.40.2.2
Gene ID: HRGMv2_4705_31_1
Type: TC
Location: 583 - 960 (+)
Gene ID: HRGMv2_4705_31_2
Type: pfam
Location: 1009 - 1467 (-)
Gene ID: HRGMv2_4705_31_3
Type: TC
Location: 1702 - 2517 (+)
Gene ID: HRGMv2_4705_31_4
Type: pfam
Location: 2599 - 3252 (-)
Gene ID: HRGMv2_4705_31_5
Type: TC
Location: 3405 - 4283 (+)
Gene ID: HRGMv2_4705_31_6
Type: pfam
Location: 4339 - 4761 (-)
Gene ID: HRGMv2_4705_31_7
Type: TC
Location: 4982 - 6022 (+)
Gene ID: HRGMv2_4705_31_8
Type: TC
Location: 6012 - 6668 (+)
Gene ID: HRGMv2_4705_31_9
Type: TC
Location: 6692 - 7531 (+)
Gene ID: HRGMv2_4705_31_10
Type: CAZyme
Location: 7697 - 9430 (+)
Gene ID: HRGMv2_4705_31_11
Type: TC
Location: 9514 - 10833 (-)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacillota_C
→
Class
Negativicutes
→
Order
Selenomonadales
→
Family
Selenomonadaceae
→
Genus
Megamonas
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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