Cluster: HRGMv2_4705_CGC2
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4705
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4705_2 | HRGMv2_4705_2_59 | 58662 | 59633 | + | 9.B.146.1.6 |
| pfam | HRGMv2_4705_2 | HRGMv2_4705_2_60 | 59676 | 61037 | + | AlaDh_PNT_C | Mur_ligase_C | Mur_ligase_M | MurD-like_N |
| CAZyme | HRGMv2_4705_2 | HRGMv2_4705_2_61 | 61063 | 62172 | + | GT28 |
Gene ID: HRGMv2_4705_2_59
Type: TC
Location: 58662 - 59633 (+)
Type: TC
Location: 58662 - 59633 (+)
Gene ID: HRGMv2_4705_2_60
Type: pfam
Location: 59676 - 61037 (+)
Type: pfam
Location: 59676 - 61037 (+)
Gene ID: HRGMv2_4705_2_61
Type: CAZyme
Location: 61063 - 62172 (+)
Type: CAZyme
Location: 61063 - 62172 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_C
Class
Negativicutes
Order
Selenomonadales
Family
Selenomonadaceae
Genus
Megamonas
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.