Cluster: HRGMv2_4705_CGC18
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4705
- CGC Family ID: CGCFAM_03708
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4705_17 | HRGMv2_4705_17_2 | 904 | 2172 | - | 2.A.56.1.1 |
| pfam | HRGMv2_4705_17 | HRGMv2_4705_17_3 | 2173 | 2640 | - | DctQ |
| TC | HRGMv2_4705_17 | HRGMv2_4705_17_4 | 2655 | 3668 | - | 2.A.56.1.9 |
| pfam | HRGMv2_4705_17 | HRGMv2_4705_17_5 | 3700 | 4371 | - | Asp_Glu_race |
| CAZyme | HRGMv2_4705_17 | HRGMv2_4705_17_6 | 4586 | 5140 | - | GH23 |
Gene ID: HRGMv2_4705_17_2
Type: TC
Location: 904 - 2172 (-)
Type: TC
Location: 904 - 2172 (-)
Gene ID: HRGMv2_4705_17_3
Type: pfam
Location: 2173 - 2640 (-)
Type: pfam
Location: 2173 - 2640 (-)
Gene ID: HRGMv2_4705_17_4
Type: TC
Location: 2655 - 3668 (-)
Type: TC
Location: 2655 - 3668 (-)
Gene ID: HRGMv2_4705_17_5
Type: pfam
Location: 3700 - 4371 (-)
Type: pfam
Location: 3700 - 4371 (-)
Gene ID: HRGMv2_4705_17_6
Type: CAZyme
Location: 4586 - 5140 (-)
Type: CAZyme
Location: 4586 - 5140 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_C
Class
Negativicutes
Order
Selenomonadales
Family
Selenomonadaceae
Genus
Megamonas
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.