Cluster: HRGMv2_4705_CGC17
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_4705
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4705_14 | HRGMv2_4705_14_45 | 49050 | 50333 | + | 2.A.1.1.27 |
| pfam | HRGMv2_4705_14 | HRGMv2_4705_14_46 | 50579 | 50896 | + | rhaM |
| pfam | HRGMv2_4705_14 | HRGMv2_4705_14_47 | 50992 | 51903 | - | S6PP | Hydrolase_3 |
| CAZyme | HRGMv2_4705_14 | HRGMv2_4705_14_48 | 52203 | 53852 | - | GT83 |
| NULL(UNKNOWN) | HRGMv2_4705_14 | HRGMv2_4705_14_49 | 54119 | 54874 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_4705_14 | HRGMv2_4705_14_50 | 55145 | 56785 | - | GT83 |
Gene ID: HRGMv2_4705_14_45
Type: TC
Location: 49050 - 50333 (+)
Type: TC
Location: 49050 - 50333 (+)
Gene ID: HRGMv2_4705_14_46
Type: pfam
Location: 50579 - 50896 (+)
Type: pfam
Location: 50579 - 50896 (+)
Gene ID: HRGMv2_4705_14_47
Type: pfam
Location: 50992 - 51903 (-)
Type: pfam
Location: 50992 - 51903 (-)
Gene ID: HRGMv2_4705_14_48
Type: CAZyme
Location: 52203 - 53852 (-)
Type: CAZyme
Location: 52203 - 53852 (-)
Gene ID: HRGMv2_4705_14_49
Type:
Location: 54119 - 54874 (+)
Type:
Location: 54119 - 54874 (+)
Gene ID: HRGMv2_4705_14_50
Type: CAZyme
Location: 55145 - 56785 (-)
Type: CAZyme
Location: 55145 - 56785 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_C
Class
Negativicutes
Order
Selenomonadales
Family
Selenomonadaceae
Genus
Megamonas
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.