Cluster: HRGMv2_4705_CGC15
🧬 Cluster Details
- Gene Count: 8
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4705
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4705_11 | HRGMv2_4705_11_14 | 13946 | 15835 | - | 3.D.7.2.3 |
| TC | HRGMv2_4705_11 | HRGMv2_4705_11_15 | 15842 | 16966 | - | 3.D.7.2.3 |
| TC | HRGMv2_4705_11 | HRGMv2_4705_11_16 | 17189 | 18073 | - | 2.A.115.1.2 |
| TF | HRGMv2_4705_11 | HRGMv2_4705_11_17 | 18300 | 19046 | + | HTH_DeoR |
| STP | HRGMv2_4705_11 | HRGMv2_4705_11_18 | 19043 | 19954 | + | PfkB |
| TC | HRGMv2_4705_11 | HRGMv2_4705_11_19 | 20012 | 21952 | + | 4.A.2.1.4 |
| STP | HRGMv2_4705_11 | HRGMv2_4705_11_20 | 22383 | 22793 | + | STAS |
| CAZyme | HRGMv2_4705_11 | HRGMv2_4705_11_21 | 22808 | 24913 | + | GH13_11 |
Gene ID: HRGMv2_4705_11_14
Type: TC
Location: 13946 - 15835 (-)
Type: TC
Location: 13946 - 15835 (-)
Gene ID: HRGMv2_4705_11_15
Type: TC
Location: 15842 - 16966 (-)
Type: TC
Location: 15842 - 16966 (-)
Gene ID: HRGMv2_4705_11_16
Type: TC
Location: 17189 - 18073 (-)
Type: TC
Location: 17189 - 18073 (-)
Gene ID: HRGMv2_4705_11_17
Type: TF
Location: 18300 - 19046 (+)
Type: TF
Location: 18300 - 19046 (+)
Gene ID: HRGMv2_4705_11_18
Type: STP
Location: 19043 - 19954 (+)
Type: STP
Location: 19043 - 19954 (+)
Gene ID: HRGMv2_4705_11_19
Type: TC
Location: 20012 - 21952 (+)
Type: TC
Location: 20012 - 21952 (+)
Gene ID: HRGMv2_4705_11_20
Type: STP
Location: 22383 - 22793 (+)
Type: STP
Location: 22383 - 22793 (+)
Gene ID: HRGMv2_4705_11_21
Type: CAZyme
Location: 22808 - 24913 (+)
Type: CAZyme
Location: 22808 - 24913 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_C
Class
Negativicutes
Order
Selenomonadales
Family
Selenomonadaceae
Genus
Megamonas
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.