Cluster: HRGMv2_4705_CGC10
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_4705
- CGC Family ID: CGCFAM_00036
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4705_6 | HRGMv2_4705_6_1 | 2 | 535 | - | GT2 |
| CAZyme | HRGMv2_4705_6 | HRGMv2_4705_6_2 | 543 | 1310 | - | GT111 |
| pfam | HRGMv2_4705_6 | HRGMv2_4705_6_3 | 1315 | 2409 | - | FAD_binding_2 | Amino_oxidase | GLF | NAD_binding_8 |
| TC | HRGMv2_4705_6 | HRGMv2_4705_6_4 | 2409 | 3848 | - | 9.B.18.1.2 |
Gene ID: HRGMv2_4705_6_1
Type: CAZyme
Location: 2 - 535 (-)
Type: CAZyme
Location: 2 - 535 (-)
Gene ID: HRGMv2_4705_6_2
Type: CAZyme
Location: 543 - 1310 (-)
Type: CAZyme
Location: 543 - 1310 (-)
Gene ID: HRGMv2_4705_6_3
Type: pfam
Location: 1315 - 2409 (-)
Type: pfam
Location: 1315 - 2409 (-)
Gene ID: HRGMv2_4705_6_4
Type: TC
Location: 2409 - 3848 (-)
Type: TC
Location: 2409 - 3848 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_C
Class
Negativicutes
Order
Selenomonadales
Family
Selenomonadaceae
Genus
Megamonas
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.