Cluster: HRGMv2_4705_CGC1
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_4705
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4705_1 | HRGMv2_4705_1_128 | 112185 | 112919 | + | GT26 |
| pfam | HRGMv2_4705_1 | HRGMv2_4705_1_129 | 113091 | 113726 | + | PS_Dcarbxylase |
| pfam | HRGMv2_4705_1 | HRGMv2_4705_1_130 | 113726 | 114445 | + | CDP-OH_P_transf |
| CAZyme | HRGMv2_4705_1 | HRGMv2_4705_1_131 | 114464 | 115699 | + | GT2 |
| TC | HRGMv2_4705_1 | HRGMv2_4705_1_132 | 115798 | 116472 | + | 3.A.1.140.1 |
| pfam | HRGMv2_4705_1 | HRGMv2_4705_1_133 | 116462 | 117349 | + | FtsX | FtsX_ECD |
| TC | HRGMv2_4705_1 | HRGMv2_4705_1_134 | 117357 | 118472 | + | 1.A.34.1.3 |
Gene ID: HRGMv2_4705_1_128
Type: CAZyme
Location: 112185 - 112919 (+)
Type: CAZyme
Location: 112185 - 112919 (+)
Gene ID: HRGMv2_4705_1_129
Type: pfam
Location: 113091 - 113726 (+)
Type: pfam
Location: 113091 - 113726 (+)
Gene ID: HRGMv2_4705_1_130
Type: pfam
Location: 113726 - 114445 (+)
Type: pfam
Location: 113726 - 114445 (+)
Gene ID: HRGMv2_4705_1_131
Type: CAZyme
Location: 114464 - 115699 (+)
Type: CAZyme
Location: 114464 - 115699 (+)
Gene ID: HRGMv2_4705_1_132
Type: TC
Location: 115798 - 116472 (+)
Type: TC
Location: 115798 - 116472 (+)
Gene ID: HRGMv2_4705_1_133
Type: pfam
Location: 116462 - 117349 (+)
Type: pfam
Location: 116462 - 117349 (+)
Gene ID: HRGMv2_4705_1_134
Type: TC
Location: 117357 - 118472 (+)
Type: TC
Location: 117357 - 118472 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_C
Class
Negativicutes
Order
Selenomonadales
Family
Selenomonadaceae
Genus
Megamonas
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.