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Cluster: HRGMv2_4704_CGC8

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_4704_3 HRGMv2_4704_3_122 130124 132037 - GT111 | GT8
CAZyme HRGMv2_4704_3 HRGMv2_4704_3_123 132034 132807 - GT111
TC HRGMv2_4704_3 HRGMv2_4704_3_124 132809 133546 - 3.A.1.103.1
TC HRGMv2_4704_3 HRGMv2_4704_3_125 133543 134319 - 3.A.1.103.4
TC HRGMv2_4704_3 HRGMv2_4704_3_126 134345 135802 - 9.B.18.1.2
pfam HRGMv2_4704_3 HRGMv2_4704_3_127 135975 136772 - DUF3226
pfam HRGMv2_4704_3 HRGMv2_4704_3_128 136777 137856 - AAA_15 | AAA_21 | AAA_23
TC HRGMv2_4704_3 HRGMv2_4704_3_129 137959 139449 - 2.A.35.2.1
peptidase HRGMv2_4704_3 HRGMv2_4704_3_130 139701 141146 - M20.UPC
pfam HRGMv2_4704_3 HRGMv2_4704_3_131 141321 141683 - P-II
TC HRGMv2_4704_3 HRGMv2_4704_3_132 141732 143117 - 1.A.11.1.4
TC HRGMv2_4704_3 HRGMv2_4704_3_133 143865 145370 + 2.A.21.2.3
Gene ID: HRGMv2_4704_3_122
Type: CAZyme
Location: 130124 - 132037 (-)
Gene ID: HRGMv2_4704_3_123
Type: CAZyme
Location: 132034 - 132807 (-)
Gene ID: HRGMv2_4704_3_124
Type: TC
Location: 132809 - 133546 (-)
Gene ID: HRGMv2_4704_3_125
Type: TC
Location: 133543 - 134319 (-)
Gene ID: HRGMv2_4704_3_126
Type: TC
Location: 134345 - 135802 (-)
Gene ID: HRGMv2_4704_3_127
Type: pfam
Location: 135975 - 136772 (-)
Gene ID: HRGMv2_4704_3_128
Type: pfam
Location: 136777 - 137856 (-)
Gene ID: HRGMv2_4704_3_129
Type: TC
Location: 137959 - 139449 (-)
Gene ID: HRGMv2_4704_3_130
Type: peptidase
Location: 139701 - 141146 (-)
Gene ID: HRGMv2_4704_3_131
Type: pfam
Location: 141321 - 141683 (-)
Gene ID: HRGMv2_4704_3_132
Type: TC
Location: 141732 - 143117 (-)
Gene ID: HRGMv2_4704_3_133
Type: TC
Location: 143865 - 145370 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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