Cluster: HRGMv2_4704_CGC4
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_4704
- CGC Family ID: CGCFAM_10670
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4704_2 | HRGMv2_4704_2_118 | 140623 | 141924 | + | 2.A.1.14.3 |
| pfam | HRGMv2_4704_2 | HRGMv2_4704_2_119 | 141964 | 142851 | + | 2-Hacid_dh_C | NAD_binding_2 | F420_oxidored | NAD_binding_11 |
| TF | HRGMv2_4704_2 | HRGMv2_4704_2_120 | 142966 | 143661 | - | GntR |
| CAZyme | HRGMv2_4704_2 | HRGMv2_4704_2_121 | 144124 | 145773 | + | GT83 |
| STP | HRGMv2_4704_2 | HRGMv2_4704_2_122 | 145793 | 146959 | + | Aminotran_1_2 |
| CAZyme | HRGMv2_4704_2 | HRGMv2_4704_2_123 | 146970 | 147914 | + | GT2 |
Gene ID: HRGMv2_4704_2_118
Type: TC
Location: 140623 - 141924 (+)
Type: TC
Location: 140623 - 141924 (+)
Gene ID: HRGMv2_4704_2_119
Type: pfam
Location: 141964 - 142851 (+)
Type: pfam
Location: 141964 - 142851 (+)
Gene ID: HRGMv2_4704_2_120
Type: TF
Location: 142966 - 143661 (-)
Type: TF
Location: 142966 - 143661 (-)
Gene ID: HRGMv2_4704_2_121
Type: CAZyme
Location: 144124 - 145773 (+)
Type: CAZyme
Location: 144124 - 145773 (+)
Gene ID: HRGMv2_4704_2_122
Type: STP
Location: 145793 - 146959 (+)
Type: STP
Location: 145793 - 146959 (+)
Gene ID: HRGMv2_4704_2_123
Type: CAZyme
Location: 146970 - 147914 (+)
Type: CAZyme
Location: 146970 - 147914 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_C
Class
Negativicutes
Order
Selenomonadales
Family
Selenomonadaceae
Genus
Megamonas
Species
Megamonas hypermegale_A
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.