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Cluster: HRGMv2_4704_CGC25

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_4704_24 HRGMv2_4704_24_22 22711 24327 + 2.A.36.6.3
TC HRGMv2_4704_24 HRGMv2_4704_24_23 24363 25526 - 2.A.1.60.3
sulfatase HRGMv2_4704_24 HRGMv2_4704_24_24 25692 27308 + S1_23
NULL(UNKNOWN) HRGMv2_4704_24 HRGMv2_4704_24_25 27733 27939 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_4704_24 HRGMv2_4704_24_26 27958 29403 - GH1
CAZyme HRGMv2_4704_24 HRGMv2_4704_24_27 29413 30867 - GH1
pfam HRGMv2_4704_24 HRGMv2_4704_24_28 30883 31206 - PTS_IIA
TC HRGMv2_4704_24 HRGMv2_4704_24_29 31239 31541 - 4.A.3.2.6
TC HRGMv2_4704_24 HRGMv2_4704_24_30 31590 32894 - 4.A.3.2.2
TF HRGMv2_4704_24 HRGMv2_4704_24_31 33203 34090 - HTH_6
TC HRGMv2_4704_24 HRGMv2_4704_24_32 34165 35313 - 2.A.1.60.3
TF HRGMv2_4704_24 HRGMv2_4704_24_33 35471 35902 + MarR
TC HRGMv2_4704_24 HRGMv2_4704_24_34 35899 36585 + 2.A.115.2.8
Gene ID: HRGMv2_4704_24_22
Type: TC
Location: 22711 - 24327 (+)
Gene ID: HRGMv2_4704_24_23
Type: TC
Location: 24363 - 25526 (-)
Gene ID: HRGMv2_4704_24_24
Type: sulfatase
Location: 25692 - 27308 (+)
Gene ID: HRGMv2_4704_24_25
Type:
Location: 27733 - 27939 (-)
Gene ID: HRGMv2_4704_24_26
Type: CAZyme
Location: 27958 - 29403 (-)
Gene ID: HRGMv2_4704_24_27
Type: CAZyme
Location: 29413 - 30867 (-)
Gene ID: HRGMv2_4704_24_28
Type: pfam
Location: 30883 - 31206 (-)
Gene ID: HRGMv2_4704_24_29
Type: TC
Location: 31239 - 31541 (-)
Gene ID: HRGMv2_4704_24_30
Type: TC
Location: 31590 - 32894 (-)
Gene ID: HRGMv2_4704_24_31
Type: TF
Location: 33203 - 34090 (-)
Gene ID: HRGMv2_4704_24_32
Type: TC
Location: 34165 - 35313 (-)
Gene ID: HRGMv2_4704_24_33
Type: TF
Location: 35471 - 35902 (+)
Gene ID: HRGMv2_4704_24_34
Type: TC
Location: 35899 - 36585 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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