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Cluster: HRGMv2_4704_CGC24

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_4704_22 HRGMv2_4704_22_1 2 598 - 2.A.23.1.2
TC HRGMv2_4704_22 HRGMv2_4704_22_2 891 1835 + 2.A.7.21.4
peptidase HRGMv2_4704_22 HRGMv2_4704_22_3 1893 3083 - M38.UPW
TC HRGMv2_4704_22 HRGMv2_4704_22_4 3201 3686 - 9.B.156.1.1
TC HRGMv2_4704_22 HRGMv2_4704_22_5 3705 4343 - 9.A.5.4.2
TC HRGMv2_4704_22 HRGMv2_4704_22_6 4917 6878 + 3.A.23.1.1
NULL(UNKNOWN) HRGMv2_4704_22 HRGMv2_4704_22_7 6928 7122 + NULL(UNKNOWN)
[View Structural Homologs]
pfam HRGMv2_4704_22 HRGMv2_4704_22_8 7122 7445 + DUF362
CAZyme HRGMv2_4704_22 HRGMv2_4704_22_9 7523 9778 - GH36
TC HRGMv2_4704_22 HRGMv2_4704_22_10 10019 11248 - 2.A.39.1.3
pfam HRGMv2_4704_22 HRGMv2_4704_22_11 11559 12779 - tRNA-synt_1b | SYY_C-terminal
CAZyme HRGMv2_4704_22 HRGMv2_4704_22_12 12812 14992 - GT51
Gene ID: HRGMv2_4704_22_1
Type: TC
Location: 2 - 598 (-)
Gene ID: HRGMv2_4704_22_2
Type: TC
Location: 891 - 1835 (+)
Gene ID: HRGMv2_4704_22_3
Type: peptidase
Location: 1893 - 3083 (-)
Gene ID: HRGMv2_4704_22_4
Type: TC
Location: 3201 - 3686 (-)
Gene ID: HRGMv2_4704_22_5
Type: TC
Location: 3705 - 4343 (-)
Gene ID: HRGMv2_4704_22_6
Type: TC
Location: 4917 - 6878 (+)
Gene ID: HRGMv2_4704_22_7
Type:
Location: 6928 - 7122 (+)
Gene ID: HRGMv2_4704_22_8
Type: pfam
Location: 7122 - 7445 (+)
Gene ID: HRGMv2_4704_22_9
Type: CAZyme
Location: 7523 - 9778 (-)
Gene ID: HRGMv2_4704_22_10
Type: TC
Location: 10019 - 11248 (-)
Gene ID: HRGMv2_4704_22_11
Type: pfam
Location: 11559 - 12779 (-)
Gene ID: HRGMv2_4704_22_12
Type: CAZyme
Location: 12812 - 14992 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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