Cluster: HRGMv2_4704_CGC20
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4704
- CGC Family ID: CGCFAM_01816
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4704_17 | HRGMv2_4704_17_42 | 33473 | 35599 | - | 4.A.1.1.16 |
| CAZyme | HRGMv2_4704_17 | HRGMv2_4704_17_43 | 35767 | 37098 | - | GH4 |
| TF | HRGMv2_4704_17 | HRGMv2_4704_17_44 | 37340 | 38131 | - | HTH_6 |
| TC | HRGMv2_4704_17 | HRGMv2_4704_17_45 | 38258 | 38854 | - | 2.A.115.2.14 |
| TC | HRGMv2_4704_17 | HRGMv2_4704_17_46 | 38942 | 40252 | - | 2.A.1.7.1 |
Gene ID: HRGMv2_4704_17_42
Type: TC
Location: 33473 - 35599 (-)
Type: TC
Location: 33473 - 35599 (-)
Gene ID: HRGMv2_4704_17_43
Type: CAZyme
Location: 35767 - 37098 (-)
Type: CAZyme
Location: 35767 - 37098 (-)
Gene ID: HRGMv2_4704_17_44
Type: TF
Location: 37340 - 38131 (-)
Type: TF
Location: 37340 - 38131 (-)
Gene ID: HRGMv2_4704_17_45
Type: TC
Location: 38258 - 38854 (-)
Type: TC
Location: 38258 - 38854 (-)
Gene ID: HRGMv2_4704_17_46
Type: TC
Location: 38942 - 40252 (-)
Type: TC
Location: 38942 - 40252 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_C
Class
Negativicutes
Order
Selenomonadales
Family
Selenomonadaceae
Genus
Megamonas
Species
Megamonas hypermegale_A
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.