Cluster: HRGMv2_4704_CGC2
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4704
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4704_1 | HRGMv2_4704_1_278 | 288938 | 289267 | + | 2.A.64.3.1 |
| TC | HRGMv2_4704_1 | HRGMv2_4704_1_279 | 289297 | 289500 | + | 2.A.64.3.1 |
| TC | HRGMv2_4704_1 | HRGMv2_4704_1_280 | 289512 | 290312 | + | 2.A.64.1.1 |
| pfam | HRGMv2_4704_1 | HRGMv2_4704_1_281 | 290445 | 290984 | - | Uma2 |
| CAZyme | HRGMv2_4704_1 | HRGMv2_4704_1_282 | 291237 | 293201 | - | GH127 |
| TC | HRGMv2_4704_1 | HRGMv2_4704_1_283 | 293219 | 294001 | - | 2.A.2.3.3 |
Gene ID: HRGMv2_4704_1_278
Type: TC
Location: 288938 - 289267 (+)
Type: TC
Location: 288938 - 289267 (+)
Gene ID: HRGMv2_4704_1_279
Type: TC
Location: 289297 - 289500 (+)
Type: TC
Location: 289297 - 289500 (+)
Gene ID: HRGMv2_4704_1_280
Type: TC
Location: 289512 - 290312 (+)
Type: TC
Location: 289512 - 290312 (+)
Gene ID: HRGMv2_4704_1_281
Type: pfam
Location: 290445 - 290984 (-)
Type: pfam
Location: 290445 - 290984 (-)
Gene ID: HRGMv2_4704_1_282
Type: CAZyme
Location: 291237 - 293201 (-)
Type: CAZyme
Location: 291237 - 293201 (-)
Gene ID: HRGMv2_4704_1_283
Type: TC
Location: 293219 - 294001 (-)
Type: TC
Location: 293219 - 294001 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_C
Class
Negativicutes
Order
Selenomonadales
Family
Selenomonadaceae
Genus
Megamonas
Species
Megamonas hypermegale_A
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.