Cluster: HRGMv2_4704_CGC19
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4704
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4704_16 | HRGMv2_4704_16_48 | 44178 | 45548 | - | 3.A.5.1.1 |
| STP | HRGMv2_4704_16 | HRGMv2_4704_16_49 | 45551 | 45907 | - | Sigma70_r4 |
| TF | HRGMv2_4704_16 | HRGMv2_4704_16_50 | 46575 | 47423 | + | HTH_AraC | HTH_AraC |
| CAZyme | HRGMv2_4704_16 | HRGMv2_4704_16_51 | 47420 | 49054 | - | GH36 |
| TC | HRGMv2_4704_16 | HRGMv2_4704_16_52 | 49223 | 49933 | - | 2.A.23.1.1 |
Gene ID: HRGMv2_4704_16_48
Type: TC
Location: 44178 - 45548 (-)
Type: TC
Location: 44178 - 45548 (-)
Gene ID: HRGMv2_4704_16_49
Type: STP
Location: 45551 - 45907 (-)
Type: STP
Location: 45551 - 45907 (-)
Gene ID: HRGMv2_4704_16_50
Type: TF
Location: 46575 - 47423 (+)
Type: TF
Location: 46575 - 47423 (+)
Gene ID: HRGMv2_4704_16_51
Type: CAZyme
Location: 47420 - 49054 (-)
Type: CAZyme
Location: 47420 - 49054 (-)
Gene ID: HRGMv2_4704_16_52
Type: TC
Location: 49223 - 49933 (-)
Type: TC
Location: 49223 - 49933 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_C
Class
Negativicutes
Order
Selenomonadales
Family
Selenomonadaceae
Genus
Megamonas
Species
Megamonas hypermegale_A
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.