Cluster: HRGMv2_4704_CGC17
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4704
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4704_12 | HRGMv2_4704_12_44 | 57552 | 58781 | - | 2.A.1.46.5 |
| TF | HRGMv2_4704_12 | HRGMv2_4704_12_45 | 58887 | 59783 | - | HTH_1 |
| CAZyme | HRGMv2_4704_12 | HRGMv2_4704_12_46 | 59824 | 61461 | - | GH13_31 |
| pfam | HRGMv2_4704_12 | HRGMv2_4704_12_47 | 61573 | 62019 | + | Acetyltransf_1 | Acetyltransf_7 | Acetyltransf_10 |
| pfam | HRGMv2_4704_12 | HRGMv2_4704_12_48 | 62337 | 63056 | + | Ubie_methyltran | MetW | Methyltransf_11 | Methyltransf_12 | Methyltransf_23 | Methyltransf_25 | Methyltransf_31 |
| TC | HRGMv2_4704_12 | HRGMv2_4704_12_49 | 63061 | 64002 | + | 3.A.1.5.20 |
| TC | HRGMv2_4704_12 | HRGMv2_4704_12_50 | 64019 | 64810 | + | 3.A.1.5.38 |
Gene ID: HRGMv2_4704_12_44
Type: TC
Location: 57552 - 58781 (-)
Type: TC
Location: 57552 - 58781 (-)
Gene ID: HRGMv2_4704_12_45
Type: TF
Location: 58887 - 59783 (-)
Type: TF
Location: 58887 - 59783 (-)
Gene ID: HRGMv2_4704_12_46
Type: CAZyme
Location: 59824 - 61461 (-)
Type: CAZyme
Location: 59824 - 61461 (-)
Gene ID: HRGMv2_4704_12_47
Type: pfam
Location: 61573 - 62019 (+)
Type: pfam
Location: 61573 - 62019 (+)
Gene ID: HRGMv2_4704_12_48
Type: pfam
Location: 62337 - 63056 (+)
Type: pfam
Location: 62337 - 63056 (+)
Gene ID: HRGMv2_4704_12_49
Type: TC
Location: 63061 - 64002 (+)
Type: TC
Location: 63061 - 64002 (+)
Gene ID: HRGMv2_4704_12_50
Type: TC
Location: 64019 - 64810 (+)
Type: TC
Location: 64019 - 64810 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_C
Class
Negativicutes
Order
Selenomonadales
Family
Selenomonadaceae
Genus
Megamonas
Species
Megamonas hypermegale_A
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.