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Cluster: HRGMv2_4704_CGC15

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_4704_9 HRGMv2_4704_9_1 460 837 + 1.A.43.1.1
pfam HRGMv2_4704_9 HRGMv2_4704_9_2 868 1323 - DUF441
TC HRGMv2_4704_9 HRGMv2_4704_9_3 1548 2348 + 3.A.1.3.27
TC HRGMv2_4704_9 HRGMv2_4704_9_4 2407 3276 - 2.A.7.3.31
pfam HRGMv2_4704_9 HRGMv2_4704_9_5 3704 4345 + Flavin_Reduct | RUBY_RBDX
pfam HRGMv2_4704_9 HRGMv2_4704_9_6 4400 4831 - YgbA_NO
TC HRGMv2_4704_9 HRGMv2_4704_9_7 5110 6171 + 3.A.1.24.1
TC HRGMv2_4704_9 HRGMv2_4704_9_8 6140 6793 + 3.A.1.24.5
TC HRGMv2_4704_9 HRGMv2_4704_9_9 6818 7645 + 3.A.1.24.5
CAZyme HRGMv2_4704_9 HRGMv2_4704_9_10 7974 9950 + GH13_4
TC HRGMv2_4704_9 HRGMv2_4704_9_11 10501 11811 - 9.A.40.2.2
TC HRGMv2_4704_9 HRGMv2_4704_9_12 12216 13526 + 2.A.45.2.4
Gene ID: HRGMv2_4704_9_1
Type: TC
Location: 460 - 837 (+)
Gene ID: HRGMv2_4704_9_2
Type: pfam
Location: 868 - 1323 (-)
Gene ID: HRGMv2_4704_9_3
Type: TC
Location: 1548 - 2348 (+)
Gene ID: HRGMv2_4704_9_4
Type: TC
Location: 2407 - 3276 (-)
Gene ID: HRGMv2_4704_9_5
Type: pfam
Location: 3704 - 4345 (+)
Gene ID: HRGMv2_4704_9_6
Type: pfam
Location: 4400 - 4831 (-)
Gene ID: HRGMv2_4704_9_7
Type: TC
Location: 5110 - 6171 (+)
Gene ID: HRGMv2_4704_9_8
Type: TC
Location: 6140 - 6793 (+)
Gene ID: HRGMv2_4704_9_9
Type: TC
Location: 6818 - 7645 (+)
Gene ID: HRGMv2_4704_9_10
Type: CAZyme
Location: 7974 - 9950 (+)
Gene ID: HRGMv2_4704_9_11
Type: TC
Location: 10501 - 11811 (-)
Gene ID: HRGMv2_4704_9_12
Type: TC
Location: 12216 - 13526 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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