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Cluster: HRGMv2_4703_CGC8

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_4703_4 HRGMv2_4703_4_96 102493 102801 + 4.A.3.2.6
TC HRGMv2_4703_4 HRGMv2_4703_4_97 102856 104199 + 4.A.3.2.2
TC HRGMv2_4703_4 HRGMv2_4703_4_98 104343 104666 + 4.A.3.2.2
CAZyme HRGMv2_4703_4 HRGMv2_4703_4_99 104691 106088 + GH1
TF HRGMv2_4703_4 HRGMv2_4703_4_100 106182 106892 + GntR
NULL(UNKNOWN) HRGMv2_4703_4 HRGMv2_4703_4_101 106987 107640 - NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_4703_4 HRGMv2_4703_4_102 107808 109529 + 3.A.1.203.4
STP HRGMv2_4703_4 HRGMv2_4703_4_103 110118 112259 + CheW | H-kinase_dim | HATPase_c
STP HRGMv2_4703_4 HRGMv2_4703_4_104 112281 112799 + CheW
TC HRGMv2_4703_4 HRGMv2_4703_4_105 112844 114526 + 1.B.52.2.2
Gene ID: HRGMv2_4703_4_96
Type: TC
Location: 102493 - 102801 (+)
Gene ID: HRGMv2_4703_4_97
Type: TC
Location: 102856 - 104199 (+)
Gene ID: HRGMv2_4703_4_98
Type: TC
Location: 104343 - 104666 (+)
Gene ID: HRGMv2_4703_4_99
Type: CAZyme
Location: 104691 - 106088 (+)
Gene ID: HRGMv2_4703_4_100
Type: TF
Location: 106182 - 106892 (+)
Gene ID: HRGMv2_4703_4_101
Type:
Location: 106987 - 107640 (-)
Gene ID: HRGMv2_4703_4_102
Type: TC
Location: 107808 - 109529 (+)
Gene ID: HRGMv2_4703_4_103
Type: STP
Location: 110118 - 112259 (+)
Gene ID: HRGMv2_4703_4_104
Type: STP
Location: 112281 - 112799 (+)
Gene ID: HRGMv2_4703_4_105
Type: TC
Location: 112844 - 114526 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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