Cluster: HRGMv2_4703_CGC4
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_4703
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4703_1 | HRGMv2_4703_1_252 | 285647 | 287542 | + | 3.A.3.6.10 |
| pfam | HRGMv2_4703_1 | HRGMv2_4703_1_253 | 287570 | 288610 | - | Metallophos |
| CAZyme | HRGMv2_4703_1 | HRGMv2_4703_1_254 | 288822 | 290636 | + | GT2 |
| pfam | HRGMv2_4703_1 | HRGMv2_4703_1_255 | 290726 | 291430 | - | VTT_dom |
| NULL(UNKNOWN) | HRGMv2_4703_1 | HRGMv2_4703_1_256 | 291723 | 292988 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_4703_1 | HRGMv2_4703_1_257 | 293035 | 293877 | + | GH73 |
| TC | HRGMv2_4703_1 | HRGMv2_4703_1_258 | 294006 | 295628 | + | 3.A.1.121.4 |
Gene ID: HRGMv2_4703_1_252
Type: TC
Location: 285647 - 287542 (+)
Type: TC
Location: 285647 - 287542 (+)
Gene ID: HRGMv2_4703_1_253
Type: pfam
Location: 287570 - 288610 (-)
Type: pfam
Location: 287570 - 288610 (-)
Gene ID: HRGMv2_4703_1_254
Type: CAZyme
Location: 288822 - 290636 (+)
Type: CAZyme
Location: 288822 - 290636 (+)
Gene ID: HRGMv2_4703_1_255
Type: pfam
Location: 290726 - 291430 (-)
Type: pfam
Location: 290726 - 291430 (-)
Gene ID: HRGMv2_4703_1_256
Type:
Location: 291723 - 292988 (+)
Type:
Location: 291723 - 292988 (+)
Gene ID: HRGMv2_4703_1_257
Type: CAZyme
Location: 293035 - 293877 (+)
Type: CAZyme
Location: 293035 - 293877 (+)
Gene ID: HRGMv2_4703_1_258
Type: TC
Location: 294006 - 295628 (+)
Type: TC
Location: 294006 - 295628 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_C
Class
Negativicutes
Order
Selenomonadales
Family
Selenomonadaceae
Genus
Selenomonas_C
Species
Selenomonas_C sp002351185
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.