Cluster: HRGMv2_4703_CGC3
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4703
- CGC Family ID: CGCFAM_10375
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4703_1 | HRGMv2_4703_1_199 | 222947 | 224197 | + | 2.A.103.1.1 |
| pfam | HRGMv2_4703_1 | HRGMv2_4703_1_200 | 224260 | 225408 | + | Metallophos |
| CAZyme | HRGMv2_4703_1 | HRGMv2_4703_1_201 | 225420 | 226982 | + | GT41 |
| NULL(UNKNOWN) | HRGMv2_4703_1 | HRGMv2_4703_1_202 | 227076 | 227912 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_4703_1 | HRGMv2_4703_1_203 | 227972 | 228769 | - | 2.A.102.4.3 |
| TC | HRGMv2_4703_1 | HRGMv2_4703_1_204 | 229043 | 230467 | + | 2.A.114.1.4 |
Gene ID: HRGMv2_4703_1_199
Type: TC
Location: 222947 - 224197 (+)
Type: TC
Location: 222947 - 224197 (+)
Gene ID: HRGMv2_4703_1_200
Type: pfam
Location: 224260 - 225408 (+)
Type: pfam
Location: 224260 - 225408 (+)
Gene ID: HRGMv2_4703_1_201
Type: CAZyme
Location: 225420 - 226982 (+)
Type: CAZyme
Location: 225420 - 226982 (+)
Gene ID: HRGMv2_4703_1_202
Type:
Location: 227076 - 227912 (+)
Type:
Location: 227076 - 227912 (+)
Gene ID: HRGMv2_4703_1_203
Type: TC
Location: 227972 - 228769 (-)
Type: TC
Location: 227972 - 228769 (-)
Gene ID: HRGMv2_4703_1_204
Type: TC
Location: 229043 - 230467 (+)
Type: TC
Location: 229043 - 230467 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_C
Class
Negativicutes
Order
Selenomonadales
Family
Selenomonadaceae
Genus
Selenomonas_C
Species
Selenomonas_C sp002351185
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.