Cluster: HRGMv2_4703_CGC28
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_4703
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4703_44 | HRGMv2_4703_44_7 | 4666 | 5310 | + | 3.A.1.3.15 |
| TC | HRGMv2_4703_44 | HRGMv2_4703_44_8 | 5291 | 6070 | + | 3.A.1.3.24 |
| NULL(UNKNOWN) | HRGMv2_4703_44 | HRGMv2_4703_44_9 | 6099 | 7037 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_4703_44 | HRGMv2_4703_44_10 | 7034 | 7741 | + | GT2 |
| CAZyme | HRGMv2_4703_44 | HRGMv2_4703_44_11 | 7762 | 9519 | + | GT41 |
| pfam | HRGMv2_4703_44 | HRGMv2_4703_44_12 | 9730 | 10020 | + | zf_Tbcl | zf_Tbcl_2 |
| TC | HRGMv2_4703_44 | HRGMv2_4703_44_13 | 10089 | 10955 | + | 3.A.1.3.27 |
Gene ID: HRGMv2_4703_44_7
Type: TC
Location: 4666 - 5310 (+)
Type: TC
Location: 4666 - 5310 (+)
Gene ID: HRGMv2_4703_44_8
Type: TC
Location: 5291 - 6070 (+)
Type: TC
Location: 5291 - 6070 (+)
Gene ID: HRGMv2_4703_44_9
Type:
Location: 6099 - 7037 (+)
Type:
Location: 6099 - 7037 (+)
Gene ID: HRGMv2_4703_44_10
Type: CAZyme
Location: 7034 - 7741 (+)
Type: CAZyme
Location: 7034 - 7741 (+)
Gene ID: HRGMv2_4703_44_11
Type: CAZyme
Location: 7762 - 9519 (+)
Type: CAZyme
Location: 7762 - 9519 (+)
Gene ID: HRGMv2_4703_44_12
Type: pfam
Location: 9730 - 10020 (+)
Type: pfam
Location: 9730 - 10020 (+)
Gene ID: HRGMv2_4703_44_13
Type: TC
Location: 10089 - 10955 (+)
Type: TC
Location: 10089 - 10955 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_C
Class
Negativicutes
Order
Selenomonadales
Family
Selenomonadaceae
Genus
Selenomonas_C
Species
Selenomonas_C sp002351185
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.