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Cluster: HRGMv2_4703_CGC26

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_4703_33 HRGMv2_4703_33_12 8438 9268 + CE4
pfam HRGMv2_4703_33 HRGMv2_4703_33_13 9469 10308 - VitK2_biosynth
TF HRGMv2_4703_33 HRGMv2_4703_33_14 10540 12225 + 0037176
TC HRGMv2_4703_33 HRGMv2_4703_33_15 12501 12767 + 8.A.8.1.6
TC HRGMv2_4703_33 HRGMv2_4703_33_16 12877 14592 + 8.A.7.1.1
NULL(UNKNOWN) HRGMv2_4703_33 HRGMv2_4703_33_17 14843 15073 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_4703_33 HRGMv2_4703_33_18 15305 16303 + 3.A.1.105.4
TC HRGMv2_4703_33 HRGMv2_4703_33_19 16378 18141 + 3.A.1.105.4
TC HRGMv2_4703_33 HRGMv2_4703_33_20 18141 19259 + 3.A.1.105.4
TC HRGMv2_4703_33 HRGMv2_4703_33_21 19256 20368 + 3.A.1.105.4
TC HRGMv2_4703_33 HRGMv2_4703_33_22 20516 21862 + 2.A.38.1.1
pfam HRGMv2_4703_33 HRGMv2_4703_33_23 22279 23811 + TrkH
TC HRGMv2_4703_33 HRGMv2_4703_33_24 23836 25290 + 2.A.38.1.1
Gene ID: HRGMv2_4703_33_12
Type: CAZyme
Location: 8438 - 9268 (+)
Gene ID: HRGMv2_4703_33_13
Type: pfam
Location: 9469 - 10308 (-)
Gene ID: HRGMv2_4703_33_14
Type: TF
Location: 10540 - 12225 (+)
Gene ID: HRGMv2_4703_33_15
Type: TC
Location: 12501 - 12767 (+)
Gene ID: HRGMv2_4703_33_16
Type: TC
Location: 12877 - 14592 (+)
Gene ID: HRGMv2_4703_33_17
Type:
Location: 14843 - 15073 (+)
Gene ID: HRGMv2_4703_33_18
Type: TC
Location: 15305 - 16303 (+)
Gene ID: HRGMv2_4703_33_19
Type: TC
Location: 16378 - 18141 (+)
Gene ID: HRGMv2_4703_33_20
Type: TC
Location: 18141 - 19259 (+)
Gene ID: HRGMv2_4703_33_21
Type: TC
Location: 19256 - 20368 (+)
Gene ID: HRGMv2_4703_33_22
Type: TC
Location: 20516 - 21862 (+)
Gene ID: HRGMv2_4703_33_23
Type: pfam
Location: 22279 - 23811 (+)
Gene ID: HRGMv2_4703_33_24
Type: TC
Location: 23836 - 25290 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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