Cluster: HRGMv2_4703_CGC22
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4703
- CGC Family ID: CGCFAM_02047
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4703_30 | HRGMv2_4703_30_18 | 15369 | 16898 | + | 2.A.14.1.1 |
| STP | HRGMv2_4703_30 | HRGMv2_4703_30_19 | 17047 | 17964 | + | SIS |
| TC | HRGMv2_4703_30 | HRGMv2_4703_30_20 | 17957 | 19378 | + | 4.A.1.2.1 |
| NULL(UNKNOWN) | HRGMv2_4703_30 | HRGMv2_4703_30_21 | 19347 | 20135 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_4703_30 | HRGMv2_4703_30_22 | 20402 | 21526 | + | GH170 |
Gene ID: HRGMv2_4703_30_18
Type: TC
Location: 15369 - 16898 (+)
Type: TC
Location: 15369 - 16898 (+)
Gene ID: HRGMv2_4703_30_19
Type: STP
Location: 17047 - 17964 (+)
Type: STP
Location: 17047 - 17964 (+)
Gene ID: HRGMv2_4703_30_20
Type: TC
Location: 17957 - 19378 (+)
Type: TC
Location: 17957 - 19378 (+)
Gene ID: HRGMv2_4703_30_21
Type:
Location: 19347 - 20135 (-)
Type:
Location: 19347 - 20135 (-)
Gene ID: HRGMv2_4703_30_22
Type: CAZyme
Location: 20402 - 21526 (+)
Type: CAZyme
Location: 20402 - 21526 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_C
Class
Negativicutes
Order
Selenomonadales
Family
Selenomonadaceae
Genus
Selenomonas_C
Species
Selenomonas_C sp002351185
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.