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Cluster: HRGMv2_4703_CGC21

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_4703_26 HRGMv2_4703_26_16 18785 19471 + 3.A.1.140.1
pfam HRGMv2_4703_26 HRGMv2_4703_26_17 19461 20348 + FtsX | FtsX_ECD
TC HRGMv2_4703_26 HRGMv2_4703_26_18 20363 21481 + 1.A.34.1.3
TC HRGMv2_4703_26 HRGMv2_4703_26_19 21501 22640 + 9.B.174.1.1
pfam HRGMv2_4703_26 HRGMv2_4703_26_20 22898 23911 - DUF3089
sulfatase HRGMv2_4703_26 HRGMv2_4703_26_21 24198 25676 + S1_6
CAZyme HRGMv2_4703_26 HRGMv2_4703_26_22 25789 27315 + AA4
TC HRGMv2_4703_26 HRGMv2_4703_26_23 27349 28566 + 3.D.7.1.1
Gene ID: HRGMv2_4703_26_16
Type: TC
Location: 18785 - 19471 (+)
Gene ID: HRGMv2_4703_26_17
Type: pfam
Location: 19461 - 20348 (+)
Gene ID: HRGMv2_4703_26_18
Type: TC
Location: 20363 - 21481 (+)
Gene ID: HRGMv2_4703_26_19
Type: TC
Location: 21501 - 22640 (+)
Gene ID: HRGMv2_4703_26_20
Type: pfam
Location: 22898 - 23911 (-)
Gene ID: HRGMv2_4703_26_21
Type: sulfatase
Location: 24198 - 25676 (+)
Gene ID: HRGMv2_4703_26_22
Type: CAZyme
Location: 25789 - 27315 (+)
Gene ID: HRGMv2_4703_26_23
Type: TC
Location: 27349 - 28566 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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