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Cluster: HRGMv2_4703_CGC20

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_4703_26 HRGMv2_4703_26_2 539 3127 + 3.A.3.5.15
TC HRGMv2_4703_26 HRGMv2_4703_26_3 3283 4077 + 3.A.1.3.2
TC HRGMv2_4703_26 HRGMv2_4703_26_4 4311 4976 + 3.A.1.3.17
TC HRGMv2_4703_26 HRGMv2_4703_26_5 4963 5682 + 3.A.1.3.24
TF HRGMv2_4703_26 HRGMv2_4703_26_6 5777 5977 + CSD
pfam HRGMv2_4703_26 HRGMv2_4703_26_7 6160 6714 + Ribosomal_S30AE | Ribosom_S30AE_C
CAZyme HRGMv2_4703_26 HRGMv2_4703_26_8 7005 8390 + AA4
pfam HRGMv2_4703_26 HRGMv2_4703_26_9 8392 9711 + CCG | CCG | Fer4_7 | Fer4_8 | Fer4_17
pfam HRGMv2_4703_26 HRGMv2_4703_26_10 9914 10813 - S-methyl_trans
TC HRGMv2_4703_26 HRGMv2_4703_26_11 11063 13660 + 3.A.5.1.3
Gene ID: HRGMv2_4703_26_2
Type: TC
Location: 539 - 3127 (+)
Gene ID: HRGMv2_4703_26_3
Type: TC
Location: 3283 - 4077 (+)
Gene ID: HRGMv2_4703_26_4
Type: TC
Location: 4311 - 4976 (+)
Gene ID: HRGMv2_4703_26_5
Type: TC
Location: 4963 - 5682 (+)
Gene ID: HRGMv2_4703_26_6
Type: TF
Location: 5777 - 5977 (+)
Gene ID: HRGMv2_4703_26_7
Type: pfam
Location: 6160 - 6714 (+)
Gene ID: HRGMv2_4703_26_8
Type: CAZyme
Location: 7005 - 8390 (+)
Gene ID: HRGMv2_4703_26_9
Type: pfam
Location: 8392 - 9711 (+)
Gene ID: HRGMv2_4703_26_10
Type: pfam
Location: 9914 - 10813 (-)
Gene ID: HRGMv2_4703_26_11
Type: TC
Location: 11063 - 13660 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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