Cluster: HRGMv2_4703_CGC2
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 3
- Substrate:
- Genome ID: HRGMv2_4703
- CGC Family ID: CGCFAM_00002
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4703_1 | HRGMv2_4703_1_59 | 59549 | 60331 | + | GT2 |
| pfam | HRGMv2_4703_1 | HRGMv2_4703_1_60 | 60328 | 61227 | + | DUF535 |
| CAZyme | HRGMv2_4703_1 | HRGMv2_4703_1_61 | 61224 | 62312 | + | GT9 |
| pfam | HRGMv2_4703_1 | HRGMv2_4703_1_62 | 62443 | 63693 | + | Wzy_C |
| CAZyme | HRGMv2_4703_1 | HRGMv2_4703_1_63 | 63721 | 64653 | + | GT2 |
| TC | HRGMv2_4703_1 | HRGMv2_4703_1_64 | 64792 | 66231 | + | 9.B.18.1.2 |
Gene ID: HRGMv2_4703_1_59
Type: CAZyme
Location: 59549 - 60331 (+)
Type: CAZyme
Location: 59549 - 60331 (+)
Gene ID: HRGMv2_4703_1_60
Type: pfam
Location: 60328 - 61227 (+)
Type: pfam
Location: 60328 - 61227 (+)
Gene ID: HRGMv2_4703_1_61
Type: CAZyme
Location: 61224 - 62312 (+)
Type: CAZyme
Location: 61224 - 62312 (+)
Gene ID: HRGMv2_4703_1_62
Type: pfam
Location: 62443 - 63693 (+)
Type: pfam
Location: 62443 - 63693 (+)
Gene ID: HRGMv2_4703_1_63
Type: CAZyme
Location: 63721 - 64653 (+)
Type: CAZyme
Location: 63721 - 64653 (+)
Gene ID: HRGMv2_4703_1_64
Type: TC
Location: 64792 - 66231 (+)
Type: TC
Location: 64792 - 66231 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_C
Class
Negativicutes
Order
Selenomonadales
Family
Selenomonadaceae
Genus
Selenomonas_C
Species
Selenomonas_C sp002351185
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.