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Cluster: HRGMv2_4703_CGC18

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_4703_22 HRGMv2_4703_22_15 16070 17050 - GT2
NULL(UNKNOWN) HRGMv2_4703_22 HRGMv2_4703_22_16 17149 17799 - NULL(UNKNOWN)
[View Structural Homologs]
pfam HRGMv2_4703_22 HRGMv2_4703_22_17 18001 19794 + MutS_V
TC HRGMv2_4703_22 HRGMv2_4703_22_18 19983 21356 + 2.A.25.1.4
TC HRGMv2_4703_22 HRGMv2_4703_22_19 21476 22789 - 1.B.23.1.5
STP HRGMv2_4703_22 HRGMv2_4703_22_20 23133 23816 + TetR_N
TC HRGMv2_4703_22 HRGMv2_4703_22_21 23892 25409 - 2.A.21.1.1
pfam HRGMv2_4703_22 HRGMv2_4703_22_22 25406 25675 - DUF997
TC HRGMv2_4703_22 HRGMv2_4703_22_23 25782 26969 - 2.A.1.2.97
Gene ID: HRGMv2_4703_22_15
Type: CAZyme
Location: 16070 - 17050 (-)
Gene ID: HRGMv2_4703_22_16
Type:
Location: 17149 - 17799 (-)
Gene ID: HRGMv2_4703_22_17
Type: pfam
Location: 18001 - 19794 (+)
Gene ID: HRGMv2_4703_22_18
Type: TC
Location: 19983 - 21356 (+)
Gene ID: HRGMv2_4703_22_19
Type: TC
Location: 21476 - 22789 (-)
Gene ID: HRGMv2_4703_22_20
Type: STP
Location: 23133 - 23816 (+)
Gene ID: HRGMv2_4703_22_21
Type: TC
Location: 23892 - 25409 (-)
Gene ID: HRGMv2_4703_22_22
Type: pfam
Location: 25406 - 25675 (-)
Gene ID: HRGMv2_4703_22_23
Type: TC
Location: 25782 - 26969 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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