Cluster: HRGMv2_4703_CGC17
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4703
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4703_15 | HRGMv2_4703_15_30 | 27207 | 27842 | - | GH23 |
| pfam | HRGMv2_4703_15 | HRGMv2_4703_15_31 | 27839 | 28306 | - | FliJ |
| TC | HRGMv2_4703_15 | HRGMv2_4703_15_32 | 28303 | 29640 | - | 3.A.6.1.1 |
| pfam | HRGMv2_4703_15 | HRGMv2_4703_15_33 | 29637 | 30431 | - | FliH | T3SS_SCTL |
| pfam | HRGMv2_4703_15 | HRGMv2_4703_15_34 | 30424 | 31458 | - | FliG_C | FliG_M | FliG_N | FliG_N |
| TC | HRGMv2_4703_15 | HRGMv2_4703_15_35 | 31459 | 33066 | - | 3.A.6.2.1 |
Gene ID: HRGMv2_4703_15_30
Type: CAZyme
Location: 27207 - 27842 (-)
Type: CAZyme
Location: 27207 - 27842 (-)
Gene ID: HRGMv2_4703_15_31
Type: pfam
Location: 27839 - 28306 (-)
Type: pfam
Location: 27839 - 28306 (-)
Gene ID: HRGMv2_4703_15_32
Type: TC
Location: 28303 - 29640 (-)
Type: TC
Location: 28303 - 29640 (-)
Gene ID: HRGMv2_4703_15_33
Type: pfam
Location: 29637 - 30431 (-)
Type: pfam
Location: 29637 - 30431 (-)
Gene ID: HRGMv2_4703_15_34
Type: pfam
Location: 30424 - 31458 (-)
Type: pfam
Location: 30424 - 31458 (-)
Gene ID: HRGMv2_4703_15_35
Type: TC
Location: 31459 - 33066 (-)
Type: TC
Location: 31459 - 33066 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_C
Class
Negativicutes
Order
Selenomonadales
Family
Selenomonadaceae
Genus
Selenomonas_C
Species
Selenomonas_C sp002351185
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.