Cluster: HRGMv2_4703_CGC15
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4703
- CGC Family ID: CGCFAM_05805
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4703_10 | HRGMv2_4703_10_29 | 29593 | 30756 | + | GH3 |
| pfam | HRGMv2_4703_10 | HRGMv2_4703_10_30 | 30947 | 32449 | + | PGM_PMM_I | PGM_PMM_II | PGM_PMM_III |
| TC | HRGMv2_4703_10 | HRGMv2_4703_10_31 | 32548 | 33513 | - | 2.A.28.2.4 |
Gene ID: HRGMv2_4703_10_29
Type: CAZyme
Location: 29593 - 30756 (+)
Type: CAZyme
Location: 29593 - 30756 (+)
Gene ID: HRGMv2_4703_10_30
Type: pfam
Location: 30947 - 32449 (+)
Type: pfam
Location: 30947 - 32449 (+)
Gene ID: HRGMv2_4703_10_31
Type: TC
Location: 32548 - 33513 (-)
Type: TC
Location: 32548 - 33513 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_C
Class
Negativicutes
Order
Selenomonadales
Family
Selenomonadaceae
Genus
Selenomonas_C
Species
Selenomonas_C sp002351185
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.