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Cluster: HRGMv2_4703_CGC14

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_4703_8 HRGMv2_4703_8_30 25715 26545 - CE11
TF HRGMv2_4703_8 HRGMv2_4703_8_31 26639 28045 - 0040266
STP HRGMv2_4703_8 HRGMv2_4703_8_32 28356 29009 - ACT | CBS | CBS
TC HRGMv2_4703_8 HRGMv2_4703_8_33 29164 29880 - 3.A.1.4.10
TC HRGMv2_4703_8 HRGMv2_4703_8_34 29885 30655 - 3.A.1.4.10
TC HRGMv2_4703_8 HRGMv2_4703_8_35 30648 31604 - 3.A.1.4.10
TC HRGMv2_4703_8 HRGMv2_4703_8_36 31617 32504 - 3.A.1.4.10
TC HRGMv2_4703_8 HRGMv2_4703_8_37 32558 33730 - 3.A.1.4.10
Gene ID: HRGMv2_4703_8_30
Type: CAZyme
Location: 25715 - 26545 (-)
Gene ID: HRGMv2_4703_8_31
Type: TF
Location: 26639 - 28045 (-)
Gene ID: HRGMv2_4703_8_32
Type: STP
Location: 28356 - 29009 (-)
Gene ID: HRGMv2_4703_8_33
Type: TC
Location: 29164 - 29880 (-)
Gene ID: HRGMv2_4703_8_34
Type: TC
Location: 29885 - 30655 (-)
Gene ID: HRGMv2_4703_8_35
Type: TC
Location: 30648 - 31604 (-)
Gene ID: HRGMv2_4703_8_36
Type: TC
Location: 31617 - 32504 (-)
Gene ID: HRGMv2_4703_8_37
Type: TC
Location: 32558 - 33730 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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