Cluster: HRGMv2_4703_CGC12
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 3
- Substrate:
- Genome ID: HRGMv2_4703
- CGC Family ID: CGCFAM_01471
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4703_7 | HRGMv2_4703_7_63 | 73366 | 74709 | + | 2.A.13.1.2 |
| TF | HRGMv2_4703_7 | HRGMv2_4703_7_64 | 74852 | 75694 | + | HTH_6 |
| TC | HRGMv2_4703_7 | HRGMv2_4703_7_65 | 75942 | 77249 | + | 4.A.3.2.8 |
| TC | HRGMv2_4703_7 | HRGMv2_4703_7_66 | 77322 | 78809 | + | 1.B.23.1.3 |
| CAZyme | HRGMv2_4703_7 | HRGMv2_4703_7_67 | 79497 | 80921 | + | GH1 |
| CAZyme | HRGMv2_4703_7 | HRGMv2_4703_7_68 | 80939 | 81724 | + | GH16_21 |
| CAZyme | HRGMv2_4703_7 | HRGMv2_4703_7_69 | 81739 | 83511 | + | GH9 |
Gene ID: HRGMv2_4703_7_63
Type: TC
Location: 73366 - 74709 (+)
Type: TC
Location: 73366 - 74709 (+)
Gene ID: HRGMv2_4703_7_64
Type: TF
Location: 74852 - 75694 (+)
Type: TF
Location: 74852 - 75694 (+)
Gene ID: HRGMv2_4703_7_65
Type: TC
Location: 75942 - 77249 (+)
Type: TC
Location: 75942 - 77249 (+)
Gene ID: HRGMv2_4703_7_66
Type: TC
Location: 77322 - 78809 (+)
Type: TC
Location: 77322 - 78809 (+)
Gene ID: HRGMv2_4703_7_67
Type: CAZyme
Location: 79497 - 80921 (+)
Type: CAZyme
Location: 79497 - 80921 (+)
Gene ID: HRGMv2_4703_7_68
Type: CAZyme
Location: 80939 - 81724 (+)
Type: CAZyme
Location: 80939 - 81724 (+)
Gene ID: HRGMv2_4703_7_69
Type: CAZyme
Location: 81739 - 83511 (+)
Type: CAZyme
Location: 81739 - 83511 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_C
Class
Negativicutes
Order
Selenomonadales
Family
Selenomonadaceae
Genus
Selenomonas_C
Species
Selenomonas_C sp002351185
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.