Cluster: HRGMv2_4703_CGC11
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4703
- CGC Family ID: CGCFAM_00164
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4703_7 | HRGMv2_4703_7_41 | 44359 | 45303 | + | 2.A.115.1.1 |
| pfam | HRGMv2_4703_7 | HRGMv2_4703_7_42 | 45581 | 48058 | + | tRNA-synt_1 | tRNA-synt_1 | Anticodon_1 | tRNA-synt_1g | tRNA-synt_1g | tRNA-synt_1g | tRNA-synt_1_2 |
| CAZyme | HRGMv2_4703_7 | HRGMv2_4703_7_43 | 48568 | 49413 | - | CE4 |
| peptidase | HRGMv2_4703_7 | HRGMv2_4703_7_44 | 49686 | 50558 | + | M24.UPA |
| TC | HRGMv2_4703_7 | HRGMv2_4703_7_45 | 50555 | 51889 | + | 3.A.18.1.1 |
Gene ID: HRGMv2_4703_7_41
Type: TC
Location: 44359 - 45303 (+)
Type: TC
Location: 44359 - 45303 (+)
Gene ID: HRGMv2_4703_7_42
Type: pfam
Location: 45581 - 48058 (+)
Type: pfam
Location: 45581 - 48058 (+)
Gene ID: HRGMv2_4703_7_43
Type: CAZyme
Location: 48568 - 49413 (-)
Type: CAZyme
Location: 48568 - 49413 (-)
Gene ID: HRGMv2_4703_7_44
Type: peptidase
Location: 49686 - 50558 (+)
Type: peptidase
Location: 49686 - 50558 (+)
Gene ID: HRGMv2_4703_7_45
Type: TC
Location: 50555 - 51889 (+)
Type: TC
Location: 50555 - 51889 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_C
Class
Negativicutes
Order
Selenomonadales
Family
Selenomonadaceae
Genus
Selenomonas_C
Species
Selenomonas_C sp002351185
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.