Cluster: HRGMv2_4703_CGC10
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4703
- CGC Family ID: CGCFAM_02075
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4703_6 | HRGMv2_4703_6_1 | 145 | 1545 | - | AA7 |
| pfam | HRGMv2_4703_6 | HRGMv2_4703_6_2 | 1548 | 2747 | - | ETF_alpha | ETF |
| pfam | HRGMv2_4703_6 | HRGMv2_4703_6_3 | 2766 | 3557 | - | ETF |
| TC | HRGMv2_4703_6 | HRGMv2_4703_6_4 | 3961 | 5343 | + | 3.B.1.1.1 |
Gene ID: HRGMv2_4703_6_1
Type: CAZyme
Location: 145 - 1545 (-)
Type: CAZyme
Location: 145 - 1545 (-)
Gene ID: HRGMv2_4703_6_2
Type: pfam
Location: 1548 - 2747 (-)
Type: pfam
Location: 1548 - 2747 (-)
Gene ID: HRGMv2_4703_6_3
Type: pfam
Location: 2766 - 3557 (-)
Type: pfam
Location: 2766 - 3557 (-)
Gene ID: HRGMv2_4703_6_4
Type: TC
Location: 3961 - 5343 (+)
Type: TC
Location: 3961 - 5343 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_C
Class
Negativicutes
Order
Selenomonadales
Family
Selenomonadaceae
Genus
Selenomonas_C
Species
Selenomonas_C sp002351185
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.