Cluster: HRGMv2_4702_CGC9
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_4702
- CGC Family ID: CGCFAM_00008
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4702_5 | HRGMv2_4702_5_6 | 6212 | 6976 | + | 3.A.1.103.6 |
| TC | HRGMv2_4702_5 | HRGMv2_4702_5_7 | 6987 | 7721 | + | 3.A.1.103.1 |
| CAZyme | HRGMv2_4702_5 | HRGMv2_4702_5_8 | 7725 | 9443 | + | GT2 |
| CAZyme | HRGMv2_4702_5 | HRGMv2_4702_5_9 | 9440 | 10828 | + | GT4 |
Gene ID: HRGMv2_4702_5_6
Type: TC
Location: 6212 - 6976 (+)
Type: TC
Location: 6212 - 6976 (+)
Gene ID: HRGMv2_4702_5_7
Type: TC
Location: 6987 - 7721 (+)
Type: TC
Location: 6987 - 7721 (+)
Gene ID: HRGMv2_4702_5_8
Type: CAZyme
Location: 7725 - 9443 (+)
Type: CAZyme
Location: 7725 - 9443 (+)
Gene ID: HRGMv2_4702_5_9
Type: CAZyme
Location: 9440 - 10828 (+)
Type: CAZyme
Location: 9440 - 10828 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_C
Class
Negativicutes
Order
Selenomonadales
Family
Selenomonadaceae
Genus
Megamonas
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.