Cluster: HRGMv2_4702_CGC7
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_4702
- CGC Family ID: CGCFAM_00063
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4702_4 | HRGMv2_4702_4_17 | 18022 | 20286 | - | GT35 |
| CAZyme | HRGMv2_4702_4 | HRGMv2_4702_4_18 | 20537 | 22027 | - | GH77 |
| pfam | HRGMv2_4702_4 | HRGMv2_4702_4_19 | 22044 | 22868 | - | Exo_endo_phos |
| TF | HRGMv2_4702_4 | HRGMv2_4702_4_20 | 23148 | 24155 | + | LacI |
| TC | HRGMv2_4702_4 | HRGMv2_4702_4_21 | 24279 | 25301 | + | 1.A.34.1.2 |
Gene ID: HRGMv2_4702_4_17
Type: CAZyme
Location: 18022 - 20286 (-)
Type: CAZyme
Location: 18022 - 20286 (-)
Gene ID: HRGMv2_4702_4_18
Type: CAZyme
Location: 20537 - 22027 (-)
Type: CAZyme
Location: 20537 - 22027 (-)
Gene ID: HRGMv2_4702_4_19
Type: pfam
Location: 22044 - 22868 (-)
Type: pfam
Location: 22044 - 22868 (-)
Gene ID: HRGMv2_4702_4_20
Type: TF
Location: 23148 - 24155 (+)
Type: TF
Location: 23148 - 24155 (+)
Gene ID: HRGMv2_4702_4_21
Type: TC
Location: 24279 - 25301 (+)
Type: TC
Location: 24279 - 25301 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_C
Class
Negativicutes
Order
Selenomonadales
Family
Selenomonadaceae
Genus
Megamonas
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.