Cluster: HRGMv2_4702_CGC5
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4702
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4702_2 | HRGMv2_4702_2_209 | 221905 | 222729 | + | 8.A.21.2.4 |
| TF | HRGMv2_4702_2 | HRGMv2_4702_2_210 | 222746 | 223642 | + | HTH_1 |
| TC | HRGMv2_4702_2 | HRGMv2_4702_2_211 | 223758 | 224987 | + | 2.A.1.46.5 |
| CAZyme | HRGMv2_4702_2 | HRGMv2_4702_2_212 | 225043 | 227268 | - | GH36 |
Gene ID: HRGMv2_4702_2_209
Type: TC
Location: 221905 - 222729 (+)
Type: TC
Location: 221905 - 222729 (+)
Gene ID: HRGMv2_4702_2_210
Type: TF
Location: 222746 - 223642 (+)
Type: TF
Location: 222746 - 223642 (+)
Gene ID: HRGMv2_4702_2_211
Type: TC
Location: 223758 - 224987 (+)
Type: TC
Location: 223758 - 224987 (+)
Gene ID: HRGMv2_4702_2_212
Type: CAZyme
Location: 225043 - 227268 (-)
Type: CAZyme
Location: 225043 - 227268 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_C
Class
Negativicutes
Order
Selenomonadales
Family
Selenomonadaceae
Genus
Megamonas
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.