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Cluster: HRGMv2_4702_CGC35

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_4702_32 HRGMv2_4702_32_1 352 1158 + 3.A.1.3.27
TC HRGMv2_4702_32 HRGMv2_4702_32_2 1203 2072 - 2.A.7.3.31
pfam HRGMv2_4702_32 HRGMv2_4702_32_3 2593 3234 + Flavin_Reduct | RUBY_RBDX
pfam HRGMv2_4702_32 HRGMv2_4702_32_4 3284 3715 - YgbA_NO
TC HRGMv2_4702_32 HRGMv2_4702_32_5 3910 4971 + 3.A.1.24.2
TC HRGMv2_4702_32 HRGMv2_4702_32_6 4940 5593 + 3.A.1.24.5
TC HRGMv2_4702_32 HRGMv2_4702_32_7 5706 6533 + 3.A.1.24.5
CAZyme HRGMv2_4702_32 HRGMv2_4702_32_8 6761 8707 + GH13_4
TC HRGMv2_4702_32 HRGMv2_4702_32_9 8780 10090 - 9.A.40.2.2
Gene ID: HRGMv2_4702_32_1
Type: TC
Location: 352 - 1158 (+)
Gene ID: HRGMv2_4702_32_2
Type: TC
Location: 1203 - 2072 (-)
Gene ID: HRGMv2_4702_32_3
Type: pfam
Location: 2593 - 3234 (+)
Gene ID: HRGMv2_4702_32_4
Type: pfam
Location: 3284 - 3715 (-)
Gene ID: HRGMv2_4702_32_5
Type: TC
Location: 3910 - 4971 (+)
Gene ID: HRGMv2_4702_32_6
Type: TC
Location: 4940 - 5593 (+)
Gene ID: HRGMv2_4702_32_7
Type: TC
Location: 5706 - 6533 (+)
Gene ID: HRGMv2_4702_32_8
Type: CAZyme
Location: 6761 - 8707 (+)
Gene ID: HRGMv2_4702_32_9
Type: TC
Location: 8780 - 10090 (-)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacillota_C
→
Class
Negativicutes
→
Order
Selenomonadales
→
Family
Selenomonadaceae
→
Genus
Megamonas
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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