Cluster: HRGMv2_4702_CGC34
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4702
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4702_28 | HRGMv2_4702_28_18 | 12830 | 13804 | + | 9.B.146.1.6 |
| pfam | HRGMv2_4702_28 | HRGMv2_4702_28_19 | 13870 | 15234 | + | AlaDh_PNT_C | Mur_ligase_C | Mur_ligase_M | MurD-like_N |
| CAZyme | HRGMv2_4702_28 | HRGMv2_4702_28_20 | 15253 | 16368 | + | GT28 |
Gene ID: HRGMv2_4702_28_18
Type: TC
Location: 12830 - 13804 (+)
Type: TC
Location: 12830 - 13804 (+)
Gene ID: HRGMv2_4702_28_19
Type: pfam
Location: 13870 - 15234 (+)
Type: pfam
Location: 13870 - 15234 (+)
Gene ID: HRGMv2_4702_28_20
Type: CAZyme
Location: 15253 - 16368 (+)
Type: CAZyme
Location: 15253 - 16368 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_C
Class
Negativicutes
Order
Selenomonadales
Family
Selenomonadaceae
Genus
Megamonas
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.