Cluster: HRGMv2_4702_CGC3
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate: alpha-glucan
- Genome ID: HRGMv2_4702
- CGC Family ID: CGCFAM_00214
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4702_2 | HRGMv2_4702_2_26 | 28570 | 29811 | - | 2.A.1.5.3 |
| CAZyme | HRGMv2_4702_2 | HRGMv2_4702_2_27 | 29826 | 31439 | - | GH32 |
| TF | HRGMv2_4702_2 | HRGMv2_4702_2_28 | 31668 | 32645 | - | LacI |
| TC | HRGMv2_4702_2 | HRGMv2_4702_2_29 | 32867 | 33469 | - | 2.A.115.2.14 |
| CAZyme | HRGMv2_4702_2 | HRGMv2_4702_2_30 | 33475 | 34827 | - | GH91 |
| TC | HRGMv2_4702_2 | HRGMv2_4702_2_31 | 34888 | 36132 | - | 2.A.1.5.2 |
Gene ID: HRGMv2_4702_2_26
Type: TC
Location: 28570 - 29811 (-)
Type: TC
Location: 28570 - 29811 (-)
Gene ID: HRGMv2_4702_2_27
Type: CAZyme
Location: 29826 - 31439 (-)
Type: CAZyme
Location: 29826 - 31439 (-)
Gene ID: HRGMv2_4702_2_28
Type: TF
Location: 31668 - 32645 (-)
Type: TF
Location: 31668 - 32645 (-)
Gene ID: HRGMv2_4702_2_29
Type: TC
Location: 32867 - 33469 (-)
Type: TC
Location: 32867 - 33469 (-)
Gene ID: HRGMv2_4702_2_30
Type: CAZyme
Location: 33475 - 34827 (-)
Type: CAZyme
Location: 33475 - 34827 (-)
Gene ID: HRGMv2_4702_2_31
Type: TC
Location: 34888 - 36132 (-)
Type: TC
Location: 34888 - 36132 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_C
Class
Negativicutes
Order
Selenomonadales
Family
Selenomonadaceae
Genus
Megamonas
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.