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Cluster: HRGMv2_4702_CGC29

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_4702_17 HRGMv2_4702_17_47 49509 50768 - 2.A.66.2.10
CAZyme HRGMv2_4702_17 HRGMv2_4702_17_48 50806 51801 - GT2
CAZyme HRGMv2_4702_17 HRGMv2_4702_17_49 51832 52905 - GT4
CAZyme HRGMv2_4702_17 HRGMv2_4702_17_50 52941 54005 - GT4
CAZyme HRGMv2_4702_17 HRGMv2_4702_17_51 53986 55122 - GT4
pfam HRGMv2_4702_17 HRGMv2_4702_17_52 55140 56507 - NTP_transferase | MannoseP_isomer | Cupin_2 | NTP_transf_3 | ManC_GMP_beta-helix
pfam HRGMv2_4702_17 HRGMv2_4702_17_53 56541 57638 - FAD_binding_2 | Amino_oxidase | GLF | NAD_binding_8
TC HRGMv2_4702_17 HRGMv2_4702_17_54 57660 58070 - 9.B.18.1.2
Gene ID: HRGMv2_4702_17_47
Type: TC
Location: 49509 - 50768 (-)
Gene ID: HRGMv2_4702_17_48
Type: CAZyme
Location: 50806 - 51801 (-)
Gene ID: HRGMv2_4702_17_49
Type: CAZyme
Location: 51832 - 52905 (-)
Gene ID: HRGMv2_4702_17_50
Type: CAZyme
Location: 52941 - 54005 (-)
Gene ID: HRGMv2_4702_17_51
Type: CAZyme
Location: 53986 - 55122 (-)
Gene ID: HRGMv2_4702_17_52
Type: pfam
Location: 55140 - 56507 (-)
Gene ID: HRGMv2_4702_17_53
Type: pfam
Location: 56541 - 57638 (-)
Gene ID: HRGMv2_4702_17_54
Type: TC
Location: 57660 - 58070 (-)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacillota_C
→
Class
Negativicutes
→
Order
Selenomonadales
→
Family
Selenomonadaceae
→
Genus
Megamonas
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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