Cluster: HRGMv2_4702_CGC28
🧬 Cluster Details
- Gene Count: 8
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4702
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4702_16 | HRGMv2_4702_16_33 | 32087 | 34183 | - | GH13_11 |
| STP | HRGMv2_4702_16 | HRGMv2_4702_16_34 | 34201 | 34542 | - | STAS |
| TC | HRGMv2_4702_16 | HRGMv2_4702_16_35 | 34909 | 36813 | - | 4.A.2.1.4 |
| STP | HRGMv2_4702_16 | HRGMv2_4702_16_36 | 36832 | 37740 | - | PfkB |
| TF | HRGMv2_4702_16 | HRGMv2_4702_16_37 | 37741 | 38484 | - | HTH_DeoR |
| TC | HRGMv2_4702_16 | HRGMv2_4702_16_38 | 38667 | 39539 | + | 2.A.115.1.2 |
| TC | HRGMv2_4702_16 | HRGMv2_4702_16_39 | 39868 | 40968 | + | 3.D.7.2.3 |
| TC | HRGMv2_4702_16 | HRGMv2_4702_16_40 | 40975 | 42879 | + | 3.D.7.2.3 |
Gene ID: HRGMv2_4702_16_33
Type: CAZyme
Location: 32087 - 34183 (-)
Type: CAZyme
Location: 32087 - 34183 (-)
Gene ID: HRGMv2_4702_16_34
Type: STP
Location: 34201 - 34542 (-)
Type: STP
Location: 34201 - 34542 (-)
Gene ID: HRGMv2_4702_16_35
Type: TC
Location: 34909 - 36813 (-)
Type: TC
Location: 34909 - 36813 (-)
Gene ID: HRGMv2_4702_16_36
Type: STP
Location: 36832 - 37740 (-)
Type: STP
Location: 36832 - 37740 (-)
Gene ID: HRGMv2_4702_16_37
Type: TF
Location: 37741 - 38484 (-)
Type: TF
Location: 37741 - 38484 (-)
Gene ID: HRGMv2_4702_16_38
Type: TC
Location: 38667 - 39539 (+)
Type: TC
Location: 38667 - 39539 (+)
Gene ID: HRGMv2_4702_16_39
Type: TC
Location: 39868 - 40968 (+)
Type: TC
Location: 39868 - 40968 (+)
Gene ID: HRGMv2_4702_16_40
Type: TC
Location: 40975 - 42879 (+)
Type: TC
Location: 40975 - 42879 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_C
Class
Negativicutes
Order
Selenomonadales
Family
Selenomonadaceae
Genus
Megamonas
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.