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Cluster: HRGMv2_4702_CGC26

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_4702_13 HRGMv2_4702_13_49 44369 45550 - CBM35inCE17 | CE17
CAZyme HRGMv2_4702_13 HRGMv2_4702_13_50 45568 46749 - CE2
TC HRGMv2_4702_13 HRGMv2_4702_13_51 46768 48252 - 1.B.23.1.5
CAZyme HRGMv2_4702_13 HRGMv2_4702_13_52 48363 49721 - GH26
TC HRGMv2_4702_13 HRGMv2_4702_13_53 49797 50105 - 4.A.3.1.1
TC HRGMv2_4702_13 HRGMv2_4702_13_54 50120 50419 - 4.A.3.2.6
TC HRGMv2_4702_13 HRGMv2_4702_13_55 50439 51749 - 4.A.3.2.9
TC HRGMv2_4702_13 HRGMv2_4702_13_56 51782 53098 - 4.A.3.2.9
CAZyme HRGMv2_4702_13 HRGMv2_4702_13_57 53113 54510 - GH1
TF HRGMv2_4702_13 HRGMv2_4702_13_58 54700 55422 - GntR
CAZyme HRGMv2_4702_13 HRGMv2_4702_13_59 55646 57286 - GH36
TC HRGMv2_4702_13 HRGMv2_4702_13_60 57397 58647 - 2.A.23.1.2
peptidase HRGMv2_4702_13 HRGMv2_4702_13_61 58798 59985 - M38.UPW
TC HRGMv2_4702_13 HRGMv2_4702_13_62 60011 60490 - 9.B.156.1.1
TC HRGMv2_4702_13 HRGMv2_4702_13_63 60506 61144 - 9.A.5.4.2
TC HRGMv2_4702_13 HRGMv2_4702_13_64 61415 63376 + 3.A.23.1.1
Gene ID: HRGMv2_4702_13_49
Type: CAZyme
Location: 44369 - 45550 (-)
Gene ID: HRGMv2_4702_13_50
Type: CAZyme
Location: 45568 - 46749 (-)
Gene ID: HRGMv2_4702_13_51
Type: TC
Location: 46768 - 48252 (-)
Gene ID: HRGMv2_4702_13_52
Type: CAZyme
Location: 48363 - 49721 (-)
Gene ID: HRGMv2_4702_13_53
Type: TC
Location: 49797 - 50105 (-)
Gene ID: HRGMv2_4702_13_54
Type: TC
Location: 50120 - 50419 (-)
Gene ID: HRGMv2_4702_13_55
Type: TC
Location: 50439 - 51749 (-)
Gene ID: HRGMv2_4702_13_56
Type: TC
Location: 51782 - 53098 (-)
Gene ID: HRGMv2_4702_13_57
Type: CAZyme
Location: 53113 - 54510 (-)
Gene ID: HRGMv2_4702_13_58
Type: TF
Location: 54700 - 55422 (-)
Gene ID: HRGMv2_4702_13_59
Type: CAZyme
Location: 55646 - 57286 (-)
Gene ID: HRGMv2_4702_13_60
Type: TC
Location: 57397 - 58647 (-)
Gene ID: HRGMv2_4702_13_61
Type: peptidase
Location: 58798 - 59985 (-)
Gene ID: HRGMv2_4702_13_62
Type: TC
Location: 60011 - 60490 (-)
Gene ID: HRGMv2_4702_13_63
Type: TC
Location: 60506 - 61144 (-)
Gene ID: HRGMv2_4702_13_64
Type: TC
Location: 61415 - 63376 (+)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacillota_C
→
Class
Negativicutes
→
Order
Selenomonadales
→
Family
Selenomonadaceae
→
Genus
Megamonas
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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