Cluster: HRGMv2_4702_CGC23
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4702
- CGC Family ID: CGCFAM_01629
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4702_10 | HRGMv2_4702_10_63 | 69003 | 70259 | - | 1.B.23.1.23 |
| pfam | HRGMv2_4702_10 | HRGMv2_4702_10_64 | 70529 | 72334 | - | Hexapep | Hexapep | Hexapep | Hexapep_2 | Hexapep_2 | Hexapep_2 |
| TC | HRGMv2_4702_10 | HRGMv2_4702_10_65 | 72583 | 73860 | - | 2.A.45.2.2 |
| TC | HRGMv2_4702_10 | HRGMv2_4702_10_66 | 73984 | 74586 | - | 2.A.115.2.14 |
| TC | HRGMv2_4702_10 | HRGMv2_4702_10_67 | 74602 | 75990 | - | 2.A.2.3.5 |
| CAZyme | HRGMv2_4702_10 | HRGMv2_4702_10_68 | 76294 | 77319 | - | GH177 |
Gene ID: HRGMv2_4702_10_63
Type: TC
Location: 69003 - 70259 (-)
Type: TC
Location: 69003 - 70259 (-)
Gene ID: HRGMv2_4702_10_64
Type: pfam
Location: 70529 - 72334 (-)
Type: pfam
Location: 70529 - 72334 (-)
Gene ID: HRGMv2_4702_10_65
Type: TC
Location: 72583 - 73860 (-)
Type: TC
Location: 72583 - 73860 (-)
Gene ID: HRGMv2_4702_10_66
Type: TC
Location: 73984 - 74586 (-)
Type: TC
Location: 73984 - 74586 (-)
Gene ID: HRGMv2_4702_10_67
Type: TC
Location: 74602 - 75990 (-)
Type: TC
Location: 74602 - 75990 (-)
Gene ID: HRGMv2_4702_10_68
Type: CAZyme
Location: 76294 - 77319 (-)
Type: CAZyme
Location: 76294 - 77319 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_C
Class
Negativicutes
Order
Selenomonadales
Family
Selenomonadaceae
Genus
Megamonas
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.