dbCAN Logo

Cluster: HRGMv2_4702_CGC19

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_4702_10 HRGMv2_4702_10_2 768 1772 - GH109
TF HRGMv2_4702_10 HRGMv2_4702_10_3 2009 2851 + HTH_AraC | HTH_AraC
TC HRGMv2_4702_10 HRGMv2_4702_10_4 2893 3204 - 4.A.3.2.4
pfam HRGMv2_4702_10 HRGMv2_4702_10_5 3241 4026 - AP_endonuc_2
pfam HRGMv2_4702_10 HRGMv2_4702_10_6 4028 5035 - GFO_IDH_MocA | GFO_IDH_MocA_C | GFO_IDH_MocA_C3
TC HRGMv2_4702_10 HRGMv2_4702_10_7 5174 6595 - 2.A.1.1.26
TF HRGMv2_4702_10 HRGMv2_4702_10_8 6858 8417 - HTH_AraC
TC HRGMv2_4702_10 HRGMv2_4702_10_9 8417 9364 - 3.A.1.2.23
Gene ID: HRGMv2_4702_10_2
Type: CAZyme
Location: 768 - 1772 (-)
Gene ID: HRGMv2_4702_10_3
Type: TF
Location: 2009 - 2851 (+)
Gene ID: HRGMv2_4702_10_4
Type: TC
Location: 2893 - 3204 (-)
Gene ID: HRGMv2_4702_10_5
Type: pfam
Location: 3241 - 4026 (-)
Gene ID: HRGMv2_4702_10_6
Type: pfam
Location: 4028 - 5035 (-)
Gene ID: HRGMv2_4702_10_7
Type: TC
Location: 5174 - 6595 (-)
Gene ID: HRGMv2_4702_10_8
Type: TF
Location: 6858 - 8417 (-)
Gene ID: HRGMv2_4702_10_9
Type: TC
Location: 8417 - 9364 (-)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacillota_C
→
Class
Negativicutes
→
Order
Selenomonadales
→
Family
Selenomonadaceae
→
Genus
Megamonas
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List