Cluster: HRGMv2_4702_CGC15
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_4702
- CGC Family ID: CGCFAM_01010
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4702_7 | HRGMv2_4702_7_15 | 14990 | 16024 | - | 9.B.34.1.3 |
| pfam | HRGMv2_4702_7 | HRGMv2_4702_7_16 | 16122 | 17105 | - | Glyco_hydro_18 |
| NULL(UNKNOWN) | HRGMv2_4702_7 | HRGMv2_4702_7_17 | 17125 | 18987 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_4702_7 | HRGMv2_4702_7_18 | 18987 | 21059 | - | GT2 |
| CAZyme | HRGMv2_4702_7 | HRGMv2_4702_7_19 | 21074 | 23758 | - | CE4 | CE4 |
Gene ID: HRGMv2_4702_7_15
Type: TC
Location: 14990 - 16024 (-)
Type: TC
Location: 14990 - 16024 (-)
Gene ID: HRGMv2_4702_7_16
Type: pfam
Location: 16122 - 17105 (-)
Type: pfam
Location: 16122 - 17105 (-)
Gene ID: HRGMv2_4702_7_17
Type:
Location: 17125 - 18987 (-)
Type:
Location: 17125 - 18987 (-)
Gene ID: HRGMv2_4702_7_18
Type: CAZyme
Location: 18987 - 21059 (-)
Type: CAZyme
Location: 18987 - 21059 (-)
Gene ID: HRGMv2_4702_7_19
Type: CAZyme
Location: 21074 - 23758 (-)
Type: CAZyme
Location: 21074 - 23758 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_C
Class
Negativicutes
Order
Selenomonadales
Family
Selenomonadaceae
Genus
Megamonas
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.