Cluster: HRGMv2_4702_CGC13
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4702
- CGC Family ID: CGCFAM_01816
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4702_6 | HRGMv2_4702_6_17 | 18362 | 19693 | + | GH4 |
| TC | HRGMv2_4702_6 | HRGMv2_4702_6_18 | 19846 | 21981 | + | 4.A.1.1.16 |
| TF | HRGMv2_4702_6 | HRGMv2_4702_6_19 | 22086 | 22856 | + | HTH_6 |
| TC | HRGMv2_4702_6 | HRGMv2_4702_6_20 | 23075 | 25207 | + | 4.A.1.1.16 |
Gene ID: HRGMv2_4702_6_17
Type: CAZyme
Location: 18362 - 19693 (+)
Type: CAZyme
Location: 18362 - 19693 (+)
Gene ID: HRGMv2_4702_6_18
Type: TC
Location: 19846 - 21981 (+)
Type: TC
Location: 19846 - 21981 (+)
Gene ID: HRGMv2_4702_6_19
Type: TF
Location: 22086 - 22856 (+)
Type: TF
Location: 22086 - 22856 (+)
Gene ID: HRGMv2_4702_6_20
Type: TC
Location: 23075 - 25207 (+)
Type: TC
Location: 23075 - 25207 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_C
Class
Negativicutes
Order
Selenomonadales
Family
Selenomonadaceae
Genus
Megamonas
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.